Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLQTTYPSNNYPIFVEHGAIDHISTYIDQFDQSFILIDEHVNQYFADKFDDILSYENVH--KVIIPAGEKTKT---FEQYQETLEYILSHHVTRNTAIIAVGGGATGDFAGFVAATLLRGVHFIQVPTTILA-HDSSVGGKVGINSKQGKNLIGAFYRPTAVIYDLDFLKTLPFEQILSGYAEVYKHALLNGESTTQEIEQHFKDREILQSLNGMDKYIAKGIETKLDIVVADEKEQGVRKFLNLGHTFGHAVEYN--HKIAHGHAVMIGIIYQFIVANILFNSNH-DIQHYINYLTKLGYPLETITDIDFETIYQYMLSDKKNDKQGVQMVLIKHFGDIVVQ-HIDQTTLQHACEQLKTYFK |
| 3QBE Chain:A ((20-367)) | -------VDPPYPVVIGTGLLDELEDLLADRHKVAVVHQPGLAE-TAEEIRKRLAGKGVDAHRIEIPDAEAGKDLPVVGFIWEVLGRIGI---GRKDALVSLGGGAATDVAGFAAATWLRGVSIVHLPTTLLGMVDAAVGGKTGINTDAGKNLVGAFHQPLAVLVDLATLQTLPRDEMICGMAEVVKAGFIADPVILDLIEADPQAALD-PAGDVLPELIRRAITVKAEVVAA----SELREILNYGHTLGHAIERRERYRWRHGAAVSVGLVFAAELARLAGRLDDATAQRHRTILSSLGLPVSYDP-DALPQLLEIMAGDKKTRAGVLRFVVLDGLAKPGRMVGPDPGLLVTAYAGVCA--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QBE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -242923 for 2913 contacts (-83.4/contact) +
2D Compatibility (PS) -35215 + (NN) -7205 + (LL) 1720
1D Compatibility (HY) -22400 + (ID) 5000
Total energy: -311023.0 ( -106.77 by residue)
QMean score : 0.529
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