Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MINEQRLLNTFLEL----------VQIDSETGNESTIQPILKEKFIALGLDVKEDEAAKHPKLGANNLVCTMNSTIEEGEVPKLYLTSHMDTVVPAINVKPIVKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQI-PHGQIQFVITVGEES-----GLIGAKELNSEL-----------------------LDADF---------------------GYAIDASADVGTTVVGAPTQMLISAKIIGKTAHAST-P-KEGVSAINIAAKAISRMKLG-QVDEITTANIGKFHG-GSATNIVADEVILEAEARSHDPERIKTQVKHMTDVFETTASELGGKAEVTVEQSYPGFKINDNEAVVKIAQESARNLGLSANTIISGGGSDGSIINTFGIPS-VILGVGY-EKIHTTNERMPIKSLNLLASQVLEIIKIVARQSK |
| 3N5F Chain:A ((3-407)) | --QGERLWQRLMELGEVGKQPSGGVTRLSFTAEERRAKDLVASYMREAGLFVYEDA--------AGNLIGRKEGTN--PDATVVLVGSHLDSVYNGGC--------------------FDGPLGVLAGVEVVQTMNEHGVVTHHPIEVVAFTDEEGARFRFGMIGSRAMAGTLPPEALECRDAEGISLAEAMKQAGLDPDRLPQAARKPGTVKAYVELHIEQGRVLEETGLPVGIVTGIAGLIWVKFTIEGKAEHAGATPMSLRRDPMAAAAQIIIVIEEEARRTGTTVGTVGQLHVYPGGINVIPERVEFVLDLRDLKAEVRDQVWKAIAVRAETIAKERNVRVTTERLQEMPPVL--CSDEVKRAAEAACQKLGYPSFWLPSGAAHDSVQLAP-ICPIGMIFVRSQDGVSHSPAEWSTKEDCAAGAEVLYHTVWQLAQ--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3N5F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98675 for 2745 contacts (-35.9/contact) +
2D Compatibility (PS) -36968 + (NN) -12209 + (LL) 2032
1D Compatibility (HY) -9200 + (ID) 3950
Total energy: -158970.0 ( -57.91 by residue)
QMean score : 0.513
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