Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNLPMNKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGVKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSDDRLTDEVK-----IKVL---QRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLT----FAVMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAKLGKKVGSDLENNKSTYVSLLGKDGAEDKLTYHRDAAVDELTQIDEQFNTKHLLEIVDLFYSRDH |
| 4GP2 Chain:A ((33-249)) | -----------------------------FREAVLYQVKTGGKRLRPLLTLAAAEAVSGQWRPALPAAAIVELIHNYSLIYDDI--IDRGDVRRGLPTVRKAFGDNAAILVGIWYREAIEEAVLDTPKPTLFAKEVAEVIKAIDEGERLDILFEAAGRSDPYF--VQARWREVTLDDYIKMVSLKTGALIAAAAKWGVLSVSD----DRGLAEAAWNFGMAAGVAFQIIDDVLDIYGDPKKFGKEIGKDIKEHK--------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GP2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10348 for 1454 contacts (-7.1/contact) +
2D Compatibility (PS) -22562 + (NN) -14573 + (LL) 6192
1D Compatibility (HY) -12800 + (ID) 3550
Total energy: -57641.0 ( -39.64 by residue)
QMean score : 0.285
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