Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKMINKLIVPVTASALLLGACGASATDSKENTLISSKAGDVTVADTMKKIGKD------------QIANASFTEMLNKILADK---YKNKVNDKKIDEQIEKMQKQYGGKDKFEKALQQQGLTADKYKENLRTAAYHKELLSDKIKISDSEIKEDSK------------KASHILIKVKSKKSDKEGLDDKEAKQKAEEIQKEVSK------DPSKFGEIAKKESMDTGSAKKDGELGYVLKGQTDKDFEKALFKLKDGEVS-EVVKSSFGYHIIKADKPTD-----FNSEKQSLKEKLVDQKVQKNPKLLTDAYKDLLKEYDVDFKDRDIKSVVEDKILNPEKLKQGGAQGGQSGMSQ |
3RFW Chain:A ((22-272)) | ------------------------------ATVATVNGKSISDTEVSEFFAPMLRGQDFKTLPDNQKKALIQQYIMQDLILQDAKKQNLEKDPL-YTKELDRA------------------------KDAILVNVYQEK-ILNTIKIDAAKVKAFYDQNKDKYVKPARVQAKHILVATE---------------KEAKDIINELKGLKGKELD-AKFSELAKEKSIDPGSKNQGGELGWFDQSTMVKPFTDAAFALKNGTITTTPVKTNFGYHVILKENSQAKGQIKFDEVKQGIENGLKFEEFK-K--VINQKGQDLLNSAKVEY--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RFW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 9729 for 1247 contacts (7.8/contact) +
2D Compatibility (PS) -23328 + (NN) -11493 + (LL) 5420
1D Compatibility (HY) -12000 + (ID) 2550
Total energy: -34222.0 ( -27.44 by residue)
QMean score : 0.553
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