Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKGTPHIQPNGVKIAKTVLMPGDPLRAKYIADNFLENVEQFNDVRNMFGYTGTYKGKEVSVMGSGMGIPSIGIYSYELYNFFDVDTIIRIGSCGALQENVNLYDVIIAQAASTNSNYVDQYNIPGH-FAPIADFELVTKAKNVADQIGATTHVGNVLSSDTFYNADPTFNDAWKKMGILGIEMESAGLYLNAIHAGKKALGIFTVSDHILRDEATTPEERQNSFTQMMEIALEIAE
4TS3 Chain:D ((2-230))
----TPHINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVNNVRGMLGFTGTYKGRKISVMGHGMGIPSCSIYTKELITDFGVKKIIRVGSCGAVLPHVKLRDVVIGMGACTDSK-VNRIRFKDHDFAAIADFDMVRNAVDAAKALGIDARVGNLFSADLFYSPDGEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTICTVSDHIRTHEQTTAAERQTTFNDMIKIALE---
General information:
TITO was launched using:
RESULT:
Template:
4TS3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -149130 for 2000 contacts (-74.6/contact) +
2D Compatibility (PS) -24070 + (NN) -6576 + (LL) 696
1D Compatibility (HY) -24800 + (ID) 6050
Total energy: -209930.0 ( -104.97 by residue)
QMean score : 0.606
(partial model without unconserved sides chains):
PDB file :
Tito_4TS3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4TS3-query.scw
PDB file :
Tito_Scwrl_4TS3.pdb
: