Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQNKQILFNKIP--EGMPQEDTFKIEEIDTPKLESDG-VLVQTLYISVDPYMRGRMTK--ADSYVQPFEIGKPIVSHVVAKVIDSTLADYKKGDVVVGM-LPWRIINHVQADQITKV--PTTDVPLDLYLSVLGMPGQTAYHGLLDIGQPKAGD--TVVVSAASGAVGSVVGQIAKIKGC-RVVGIAGGDKKVNYLTETLGFDAGIDYKKEDFAEALAQAVPDGIDVYFENVGGTVGDEVFKHLNRFARVPVCGAISSYNH---PEADIGPRIQGTLIKKQVMMRGFLVSEFANAFKEASEQLATWVQEGKIQSQVTIEDGFENAPHAFKNLFTGDNFGKQVIKVTE |
2ZB3 Chain:A ((6-348)) | ---QRVVLNSRPGKNGNTVAENFRVEEFSLPDALNEGQVQVRTLYLSVDPYMRCKMNEDTGTDYLAPWQLAQVADGGGIGVVEESKHQKLTKGDFVTSFYWPWQTKAILDGNGLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKTGNVAEQLREACPGGVDVYFDNVGGDISNAVISQMNENSHIILCGQISQYSNDVPYPPPLPPAVEAIRKERNITRERFTVLNYKDKFEPGILQLSQWFKEGKLKVKETMAKGLENMGVAFQSMMTGGNVGKQIVCIS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZB3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -221785 for 2852 contacts (-77.8/contact) +
2D Compatibility (PS) -35567 + (NN) -11626 + (LL) 352
1D Compatibility (HY) -27600 + (ID) 5900
Total energy: -302126.0 ( -105.93 by residue)
QMean score : 0.512
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