Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRCAKKEDLNAILAIYNDAIINTTAVYTYKPQTIDERIAWFETKQRNHEPIFVFEENGSVLGFATFGSFRPWPAYQYTIEHSIYVDASARGKGIASQLLQRLIVEAKAKGYRTLVAGIDASNEASIKLHQKFNFKHAGTLTNVGYKFDYWLDLAFYELDLKD
1YR0 Chain:A ((6-166))
ELRDATVDDLSGIMEIYNDAVVNTTAIWNEVVVDLENRKDWFAARTSRGFPVIVAILDGKVAGYASYGDWRAFDGYRHTREHSVYVHKDARGHGIGKRLMQALIDHAGGNDVHVLIAAIEAENTASIRLHESLGFRVVGRFSEVGTKFGRWLDLTCMELKL--
General information:
TITO was launched using:
RESULT:
Template:
1YR0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100554 for 1176 contacts (-85.5/contact) +
2D Compatibility (PS) -17813 + (NN) -7560 + (LL) -12
1D Compatibility (HY) -14800 + (ID) 3250
Total energy: -143989.0 ( -122.44 by residue)
QMean score : 0.609
(partial model without unconserved sides chains):
PDB file :
Tito_1YR0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1YR0-query.scw
PDB file :
Tito_Scwrl_1YR0.pdb
: