Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIKNVLLSGGSGKRLWPLSRSLYPKQFLKLFDHKSLFELSFKRNASL-VDETLIVCNEKHYFLALEEIKNEI---------------KNKSVGFLLESLSKNTANAIALSALMSDKEDLLIVTPSDHLIKDFQAYENAIKKAINLA-QKGF-LVTFGISIEKPNTEFGYIESP----NGLDVKRFIEKPSLEKAIEFQKSGGFYFNSGMFVFQAGVFLDELKKHAPTILKGCERAFESLENTHFFEQKIARLSEKSMQDLEDMSIDIALMQQSHKIKMVELNAKWSDLGNFNALFEEAANGTKENVSLNQTPIFAKESTNNLVFSHKVSALLGVEDLAIIDTKDALLVAHKDKAKDLKALVSEIETHNQELLQTHTKVYRPWGSYEVLHESGCYKVKILEVKPNARLSLQKHFHRSEHWVVISGMASVELDHQSFELQANESTYIPKNTLHRLANYGKIPLIIIEVQVGEYVGEDDIVRVDDDFNRQNQNA |
| 3JUK Chain:A ((1-272)) | MIKKCLFPAAGYGTRFLPITK-TIPKEMLPIVD-KPLIQYAVEEAMEAGCEVMAIVTGRN-KRSLEDYFDTSYTNKENALKSIRNIIEKC-CFSYVRQKQMKGLGHAILTGEALIG-NEPFAVILADDLCISHD-HPSVLKQMTSLYQKYQCSIVAIEEVALEEVSKYGVIRGEWLEEGVYEIKDMVEKPNQEDA------PSNLAVIGRYILTPDIF-EILSETKPGK------------------NNEIQI-TDA--------LRT-QAKR-KRIIAYQFKGKRYDCGSVEGYIEASNAYYKKRL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JUK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68071 for 2065 contacts (-33.0/contact) +
2D Compatibility (PS) -26415 + (NN) -12008 + (LL) 16976
1D Compatibility (HY) -10400 + (ID) 2100
Total energy: -102018.0 ( -49.40 by residue)
QMean score : 0.373
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