Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLVSRFLNAIDPFNLGVLLSRFQIKNGCIYGVCSYKVSKFTPGYEESKARVLNALNILSKHQIWQSNQESVTKVKGTFVFILENDLHLDENSFYKKLLNLIIDNDFFNRSHLVT---P--SNGTNSHPELHRSITPREAARIQSFSDDYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSARNDTNPSR |
3SWR Chain:A ((909-1000)) | ------------------------------------------------------------------------------------------HNHWAGLYGRLEWDGFFSTT--VTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKLCMLAKA---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SWR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3199 for 489 contacts (-6.5/contact) +
2D Compatibility (PS) -9520 + (NN) -5874 + (LL) 6488
1D Compatibility (HY) -2400 + (ID) 1700
Total energy: -16205.0 ( -33.14 by residue)
QMean score : 0.239
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