Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYIKFFKELNNKNVNLVGGKNASIGEMFQELVPIGIKVPDGFAITSEAYWYLLEQGG-----AKQKIIELLENVDA-----------------------------TEIDVLKIRSKQIRELIFGTPFPSDLRDEIFQAYEILSQ--------------QYHMKEADVAVRSSATAEDLPDASFAGQQDTYLNIKG-------KTELIHYIKSCLASLFTDRAISYRASRGFDHLKVALSVGVQKMVRADKG---SAGVMFSIDTETGFKDAVFITSAWGLGENVVGGTINPDEFYVFKPTLEQNKRPIIKRQLGNKTQKMVYAPRGSEHPTRNIKTTKKEWQSFSLSDEDVLILAKYAIEIEKHYSKEAKQYRPMDIEWAKDGESGEIFIVQARPETVQSQKTKEENQVFEKFKFKNPNEKKEIILQGRAIGSKIGSGKVRI-INDLEHMNSFKEGEILVTDNTDPDWEPCMKKASAVITNRGGRTCHAAIVAREIGVPAIVGVSGAT------------DSLYTGMEITVSCAEGEEGYVYAGIYEHEIERVELSNMQETQTKIYINIGNPEKAFSFSQLPNHGVGLARMEMIILNQIKAHPLALVDLHHKKSVKEKNEIENLMAGYANPKDFFVKKIAEGIGMISAAFYPKPVIVRTSDFKSNEYM-------RMLGGSSYEPNEENPMLGYRGASRY--YSESYNEAFSWECEALALVREEMGLT-NMKVMIPFLRTIEEGKKVLEILRKNNLESGKNG-----LEIYIMCELPVNVILADDFLSLFDGFSIGSNDLTQLTLGVDRD--SELVSHVFDER-----------NEAMLKMFKKAIEACKRHNK--YCGICGQAPSDYPEVTEFLVKEGITSISLNPDSVIPTWNAVAKLEKELKDHGLTAR |
| 1JDE Chain:A ((1-873)) | AKWVYKFEEGNASMRNLLGGAGCNLAEMTIL----GMPIPQGFTVTTEACTEYYNSGKQITQEIQDQIFEAITWLEELNGKKFGDTEDPLLVSVRSGARASMPGMMDTILNLGLNDVAVEGFAKKTGNPRFAYDSYRRFIQMYSDVVMEVPKSHFEKIIDAMKEEKGVHFDTDLTADDLKELAEKFKAVYKEAMNGEEFPQEPKDQLMGAVKAVFRSWDNPRAIVYRRMNDIPG-DWGTAVNVQTMVFGNKGETSGTGVAFTRNPSTGEKGIYGEYLINAQGEDVVAGVRTPQPITQLENDM-----PDCYKQFMDLAMKLEKHFRDMQ------------DMEFTIEEGKLYFLQ----------TRNGKRTAPAALQIACDLVDEGMITEEEAVVRIEAKSLDQLLH---PTFNPAALKAGEVIGSALPASPGAAAGKVYFTADEAKAAHEKGERVILVRLETSPEDIEGMHAAEGILTVRGGMTSHAAVVARGMGTCCVSGCGEIKINEEAKTFELGGHTFAEGDYISLDGSTGKI-ETQEASVSGSFERIMVWADKFRTLKVRTNADTPEDTLNAVKLGAEGIGLCRTEHMFFEADRIMKIRKMILS-DSVEAREEALNELIPFQKGDFKAMYKALEGRPMTVRYLDPPLHEFVPHTEEEQAELAKNMGLTLAEVKAKVDELHEFNPMMGHRGCRLAVTYPEIAKMQTRAVMEAAIEVKEETGIDIVPEIMIPLVGEKKELKFVKDVVVEVAEQVKKEKGSDMQYHIGTMIEIPRAALTADAIAEEAEFFSFGTNDLTQMTFGFSRDDAGKFLDSYYKAKIYESDPFARLDQTGVGQLVEMAVKKGRQTRPGLKCGICGEHGGD-PSSVEFCHKVGLNYVSCSPFRVPIARLAAAQAALNNK------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JDE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139620 for 6779 contacts (-20.6/contact) +
2D Compatibility (PS) -81001 + (NN) -18658 + (LL) 3272
1D Compatibility (HY) -17200 + (ID) 8800
Total energy: -262007.0 ( -38.65 by residue)
QMean score : 0.319
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