Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVYLR--KIDNQILHNKRISIKKGILEHFFDKANNQDEVDMSGILSNYNDK--VSILLATDPRLGGGIKRIISAEVDK-IKENRLDYELKIDDILLFTYISYKKYTLEIILLADTRYNVLNGLINNSKHLLVFSENETRTLDDGKINESVRIDGGKNIILYGVPGSGKSYTLQRDYCNNSVVEKIVFHPDYSYSDFVGQIMPSVDDSGIVSYKFNPGPFTNILKKAYHNPQTKHVLVIDEINRGNVPAIFGEI------FQLLDRLKHDKDGFKKGSSEYAIN-NTDIANIVHNDKNASIRIPSNLWIVATMNTSDQNVFTLDTAFQRRFSMQLVENSFENVDDD---FKNMKIL-DTDMTWQKFCTTINEKIAQNNEGLSSMEDKRFGVYFVSIDDLKSKENF-AHKVIKYLWDDVFKFDRNIIFNTTKFNT-LEAVVKNFI--KEKDRTQF-------DVFSDDIKELLFNV------ |
| 2BMF Chain:A ((169-618)) | MASIEDNPEIEDDIFRKKRLTIMD------LHPGAGKTKRYLPAIVREAIKRGLRTLILAPT--------RVVAAEMEEALRGLPIRYQTGREIVDLMC---HATFTMRL--LSPIRVPNYNLIIMDEAHF----TDPASIAARGYISTRVEMGEAAGIFMTATPPGSRDPFPQS---NAPIMDEEREIPERSWNS--GHEWVTDFKGKTVWFVPSIKAGNDIAACLRKNGKK-----VIQLSRKTFDSEYIKTRTNDWDFVVTTDISEMGANFK---AERVIDPRRCMKPVILTDGEERVILAGPMPV--THSSAAQRRGRVGRNPKNENDQYIYMGEPLENDEDCAHWKEAKMLLDNINTPEGIIPSMFEPEREKVDAIDG-EYRLRGEARKTFVDLMRRGDLPVWLAYRVAAEGINYADRRWCFDGVKNNQILEENVEVEIWTKEGERKKLKPRWLDARIYSDPLALKEFKEFAAGRK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BMF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 41762 for 3124 contacts (13.4/contact) +
2D Compatibility (PS) -42342 + (NN) -1436 + (LL) 2968
1D Compatibility (HY) -11600 + (ID) 3450
Total energy: -14098.0 ( -4.51 by residue)
QMean score : 0.129
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