Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEKLVIGSRGSELALWQANHIKERLKKECSMESEIRIVKTTGDKILDAPLNKIGGKGLFTKELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKVGTTSLRRSMQIKFKRKDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLNVQGAKYRKAFSVKEMIPSMGQGALGVEMLKNHKHFITLQKLNNEESAFCCHLEREFIKGLN--GGCQIPIGVHANLMG--DEVKIRAVLGLPNGKEVIAKEKQGDKTKAFDLVQELLEEFLQSGA-KEILEKAQLF------ |
2A35 Chain:A ((4-215)) | ----------------------------------------TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHP---------------------------------------------------------RLDNPVGPLAELLPQLD-GSIDTAFCCLGT----TIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSSIFYNRVKGELEQALQEQGWPQLTIARPSLLFGPREEFRLAEILAAP-------IAGKYHGIEACDLARALWRLALEEGKGVRFVESDELRKLGKGS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2A35.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4424 for 1641 contacts (-2.7/contact) +
2D Compatibility (PS) -20146 + (NN) 3100 + (LL) 8952
1D Compatibility (HY) -8400 + (ID) 2200
Total energy: -23118.0 ( -14.09 by residue)
QMean score : 0.309
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