Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEHNGHDKLNGVLRGFLGDSFTLDGKEGGLNMSKMLEFIKKEKPKMNVLLMGATGVGKSSLINALFGKEITKTGVGKPITQHLEKYIDEEKGLILWDTKGIEDKDYHDTMQSIKKEMEDSFKTLDEKEAIDVAYLCVKETSSRVQERERELLSFAKHWNIPTIVVFTHTQAEAGDAFVQETKGIIDEEWGFKGFVRAYVRVNSVAFSFRGLKVPVEGLEELVDETKKCLSDAEKNKKRHFLSIQRVKIQERKQAMIEECKTIIHVASGAAGVAGLIPIPFSDALAIAPIQAGMIYKMNDAFGMDLDKSVGASLVAGLLGVTAVAQVGRTLVNGFLKFIPVVGSVAGGATAAVITEGIGFAYLKVLEKCFNDETGEVNLPGEVGMITSLFKENYLNLDTIKKLKP |
1SVI Chain:A ((14-193)) | -----------------------------------KPEQYPEGGLPEIALAGRSNVGKSSFINSLINR------------QTLNFYI-INDELHFVDVPGYGFAKVSKSEREAWGRMIETY--ITTREELKAVVQIVDLRHA-PSNDDVQMYEFLKYYGIPVIVIATKADKIPKGKWDKHA-KVVRQTLNIDP-EDELILFSSE----TK-----KGKDEAWGAIKKMINR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SVI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51516 for 1290 contacts (-39.9/contact) +
2D Compatibility (PS) -18113 + (NN) -5751 + (LL) 15216
1D Compatibility (HY) -9200 + (ID) 1650
Total energy: -71014.0 ( -55.05 by residue)
QMean score : 0.533
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