Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----MQYANAYQAYQHNRVSVESPAKL----------IEMLYEGILRFSSQAKRCIENEDIEKKIYYINRVTDIFTELLNILDYEKGGKVAVYLTGLYTHQIKVLTQANVENDASKIDLVLNVARGLLEAWREIHSDELA--
1IQ0 Chain:A ((468-592))
DTGPYVQYAHARAHSILRKAGEWG----APDLSQATPYERALALDLLDFEEAVLEAAEERTPHVLAQYLLDLAASWNAYYN---ARENGQPATPVLT-----------APEGLRELRLSLVQSLQRTLATGLDLLGIPAPEVM
General information:
TITO was launched using:
RESULT:
Template:
1IQ0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47240 for 728 contacts (-64.9/contact) +
2D Compatibility (PS) -11511 + (NN) -4056 + (LL) 1840
1D Compatibility (HY) 400 + (ID) 850
Total energy: -61417.0 ( -84.36 by residue)
QMean score : 0.462
(partial model without unconserved sides chains):
PDB file :
Tito_1IQ0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IQ0-query.scw
PDB file :
Tito_Scwrl_1IQ0.pdb
: