Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMP-----GGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEMTAIQRVSKKGSHFVILAEDGKTFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCDGF--FYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFRCAPITLEHAKNNSKIEFLTPYVVEE--IKGDASGVSSLSIKNTATNEKRELVVPGLFIFVGYDVNNAVLKQEDNSMLCECDEYGSIVVDFSMKTNVQGLFAAGDIRIFAPKQVVCAASDGATAALSVISYLEHH |
| 2WHD Chain:B ((35-341)) | -----IIGSGPAAHTAAIYAARAELK-PVLFEGWMANDIAAGGQLTTTTDVENFPGFPTGIMGIDLMDNCRAQSVRFGTNILSETVTEVDFSARPFRVTS-DSTTVLADTVVVATGAVARRLYFSGSDTYWNRGISACAVCDGAAPIFRNKPIAVIGGGDSAMEEGNFLTKYGSQVYIIHRRNTFRASKIMQARALSNPKIQVVWDSEVVEAYGGAGGGPLAGVKVKNLVTGEVSDLQVSGLFFAIGHEPATKFL---NGQLELHADGYVATKPG-STHTSVEGVFAAGDVQDKKYRQAITAAGSGCMAALDAEHYLQEV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WHD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -195724 for 2523 contacts (-77.6/contact) +
2D Compatibility (PS) -31750 + (NN) -7300 + (LL) 980
1D Compatibility (HY) -17600 + (ID) 5450
Total energy: -256844.0 ( -101.80 by residue)
QMean score : 0.520
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