Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDISIFREYDIRGIYPTTLDENTAFSIGVELGKIMREY---DKSVFVGHDARVHGRFLFEVLSAGLQSSGLKVYDLGLIPTPVAYFAAFNEIDNIQCPNSIMITGSHNPKEYNGFKITL-NQNPFYGKDIQALKNTLLNAKHEI--KPLKETPEKVNALEAYHRYLIKDF---KHL-KNLKYKIALDFGNGVGALGLEPILKALNIDFSSLYSDPDGDFPNHHPDPSEAKNLKDLEKHMRENAILIGFAFDGDADRIAMLSS-HHIYAGDELAILFAKRLHAQGITPFVIGEVKCSQVMYNAIN-TF-GKTLMYKTGHSNLKIKLKETNAHFAAEMSGHIFFKERYFGYDDALYACLRALELLLEQSPSDLENTIKNLPYSYTTPEEKIAVSEEEKFEIIRNLQEALKNPPSHFPTIKEIISIDGVRVVFEHGFGLIRASNTTPYLVSRFEGKDETTALEYKRALLGLLEKL |
| 1WQA Chain:A ((2-452)) | --GKLFGTFGVRGIANEKITPEFAMKIGMAFGTLLKREGRKKPLVVVGRDTRVSGEMLKEALISGLLSVGCDVIDVGIAPTPAVQWATKH----FNADGGAVITASHNPPEYNGIKLLEPNGMGLKKEREAIVEELFFKEDFDRAKWYEIGEVRREDIIKPYIEAIKSKVDVEAIKKRK--PFVVVDTSNGAGSLTLPYLLRELGCKVITVNAQPDGYFPARNPEPN-EENLKEFMEIVKALGADFGVAQDGDADRAVFIDENGRFIQGDKTFALVADAVLKEKGGGLLVTTVATSNL-LDDIAKKHGAKVMRTKVGDLIVARALYENNGTIGGEENGGVIFPEH-VLGRDGAMTVAKVVEIFA-KSGKKFSELIDELPKYY-QIKTKRHVEG-DRHAIVNKVAEMAR-----ERGY-TVDTTDGAKIIFEDGWVLVRASGTEPIIRIFSEAKSKEKAQEYLNLGIELLEKA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WQA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -238088 for 4088 contacts (-58.2/contact) +
2D Compatibility (PS) -47802 + (NN) -30285 + (LL) 908
1D Compatibility (HY) -20800 + (ID) 5800
Total energy: -341867.0 ( -83.63 by residue)
QMean score : 0.496
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