Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSSNDLFMVVLGAILLVLVCLVGYLYLKEKEFYHKMRRLEKTLDESYQENYLYSKRLRELEGRLEGLSLEKSAKEDSSLKTTLSHLYNQLQEIQKSMDKERDYLEEKIITLENKFKDMGHYAASDEVNEKQVLKMYQEGYSVDSISKEFKVSKGEVEFILNMAGLKW |
| 1SFC Chain:C ((7-83)) | ------------------------------------------------------------MRNELEEMQRRADQLADESLESTRRML-QLVEESKDAGIRTLVMLDEQGEQLDRVEEGMNHINQDMKEAEKNLKDLGK------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SFC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10231 for 303 contacts (33.8/contact) +
2D Compatibility (PS) -8354 + (NN) -4240 + (LL) 8064
1D Compatibility (HY) -1200 + (ID) 750
Total energy: 3751.0 ( 12.38 by residue)
QMean score : 0.467
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