Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MKNQVKKIL-GMSVVAAMVIVGCSHAPKSGISKSNKAYKEATKGAPDWVVGDLEKVAKYEKYSGVFL---GRAEDLITN----NDVDYSTNQATAKARANLAANLK-S-TL-QKDLENEKTRTVDASG------KRSI-SGTDTEKISQLVDK---ELIASKMLARYV--------GKDRVFVLVGLDKQIVDKVR--------EELGMVKK---------------------------------------- |
| 4RGP Chain:A ((2-256)) | NATEQETLTILLDVYAYYQAYQIVKASQFFSDDIIFLLELLKERRELNVDFLFQNQVHLQELELTYHISLLDNAYEEELLANYIMDLEAKLRNDHIIDFVRSVSPILYRLLMRLMQSQVADINDYIYDAKNDQYDTWKFDKMHDSANPFVQNFVAKGRDSKITSRSLADFIQLTDLPQAIKDNILLLRDFEKSVRNPLAHLIKPFDEEELHRTTGFSSQTFLEKIIQLAVFSGIHYDNDKFYFDKVNELIKRIYQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RGP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5043 for 1049 contacts (4.8/contact) +
2D Compatibility (PS) -18554 + (NN) -11398 + (LL) 0
1D Compatibility (HY) -10000 + (ID) 1650
Total energy: -36559.0 ( -34.85 by residue)
QMean score : 0.330
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