Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLIARFKKALISYSLGVLLVSSLLGVANASNQEIQVKDYFG-EQTIKLPVSKIIYLGSFAEVPAMFNTWDRVVGIS---DYAFKSDIVKATLKDPERIKPMSSDHVAALNVELLKKLSPDLVVT-FVGNPKAVEHAKKF-GISFLSFQEKTIVEVMEDIDAQAKAL--EVDASKKLAKMQETLDFIKERLKNVKKKKGVELFH---KANKISGHQALDSDILEKGGIDNFGLKYVKFGR-------ADISVEKIVKENPEIIFIWWISPLSPEDVLNNPKFSTIKAIKNKQVYKLPTMDIGGPRAPLISLFIALKAHPEAFKGVDINAIIKDYYKVVFDLNDAEVEPFLWH |
| 3R5T Chain:A ((3-298)) | -----------------------------NVWPRTFQNADGSITTIPSQPKRILSTAVTVTGTLLAIDAPVIASAATTQSTFFEQWRKLAELRQVKKLWPAGS-----VDLESVYVEQPDLIVVSMIGADSARDQIPLLQAIAPTILVDYSDQTWQSLAQQLGLATGLEEQAERTIHNFEQWTKQVRDVLDLPKGRANIVSYHGPGVVNAVAKAQSAHAQLLQSVGVVLEEPDPAWQAGSIVHRDFLRIHYEHLTQLQAETTFLITMTDQQAQAFLHDPILKNLPSIQRKQVYGLGE---NSFRIDLFSAREIINSLLRRFAGEQAQSLVMPL------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R5T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78339 for 2301 contacts (-34.0/contact) +
2D Compatibility (PS) -29753 + (NN) -14226 + (LL) 5228
1D Compatibility (HY) -2000 + (ID) 2200
Total energy: -121290.0 ( -52.71 by residue)
QMean score : 0.407
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