Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIVIKDAHFLTSSNNLSQCPASLTSEMVILGRSNVGKSTFINTLLGKNLAKSSATPGKTRLANFFSTTWEDKENALTTTFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLIDARHLDLEIDKNAKENIQA-LLRPDQAYLSLFTKFDKLNKNE-QHRLFLNAPKPFLINTIHFNALSSKYPTLEIVRQTLLKYLLTNPL
3IEV Chain:A ((8-179))
---------------------MKVGYVAIVGKPNVGKSTLLNNLLGTKVSIISPKAGTTRMRVLGVKN-----IPNEAQIIFLDTPGIYEPKKSDVLGHSMV---EIAKQSLEEADVILFMIDATEGWRPRDEEIY---QNFIKPLNKPVIVVINKIDKIGPAKNVLPLIDEIHKKHPELTEIVPISALKGANL----DELVKTILKYLP
General information:
TITO was launched using:
RESULT:
Template:
3IEV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70135 for 1316 contacts (-53.3/contact) +
2D Compatibility (PS) -18217 + (NN) -6472 + (LL) 2772
1D Compatibility (HY) -4800 + (ID) 1900
Total energy: -98752.0 ( -75.04 by residue)
QMean score : 0.436
(partial model without unconserved sides chains):
PDB file :
Tito_3IEV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IEV-query.scw
PDB file :
Tito_Scwrl_3IEV.pdb
: