Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MLPVFICEDNRMQRERLTKYIEDYIMVEHFDMKLELSTGDPFELVSRMPTHQGMGLYFLDIDLGQPDMNGFELAQEIRKFDPRGFIIFITTHAELSYMTFTYKVEALDYIIKD-DIDLLHDRVLACMKQAEERISNDQDMQKYFTFKVSDKKIIHELLDDILFFETAPTIHKVILHGKNRQVEFYGKLKNIEKMLDESFYRCHRSYIVNKKNIHELDTTKGVVKMSNGENCYASSKLIKSLSL
1S8N Chain:A ((11-200))
AVPRRVLIAEDEALIRMDLAEMLREE------GYEIVGEAGDGQEAVELAELHK-PDLVIMDVKM--PRRDGIDAASEIAS-KRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPAIELAVSRFREITALEGEVAT-----LSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRAAMDRRTTMKRVAEVVLETLG----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1S8N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113174 for 1524 contacts (-74.3/contact) +
2D Compatibility (PS) -20261 + (NN) -9306 + (LL) 3680
1D Compatibility (HY) -3200 + (ID) 1500
Total energy: -143761.0 ( -94.33 by residue)
QMean score : 0.378
(partial model without unconserved sides chains):
PDB file :
Tito_1S8N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S8N-query.scw
PDB file :
Tito_Scwrl_1S8N.pdb
: