Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VITNQRDIDKYYDMLVEKNSNYEGVFFVGVKTTGILCRPTCPAKKPLKENCEFFSTAKEALLASYRPCKRCEPLSNPTKLSPAVKLLVDAIEKNPEKKWTD-KDFDD-----LSISANTARRQ---FKKQFGMTFIEY---ARSRRLGLAFKHIRGGNSIINAQLDSGYESGNGFRDAFSKTMGEVPHKSKDITILYSAWLETKLGSMLAISDDDSLLLLE------FVDRKGLETEIKKLRMRLNAAITPEKTIIIQQI----EAELAQYFN--GELIDFKTPIRYIGSDFQENVWEELRRIP--IGETISYKGLAEKLGRSTASRAVARANGANQLSLIVPCHRVINTNGALGGY-GGGLARKEW--------LIKHEKMVPK---- |
| 3JWD Chain:A ((1-369)) | --TEKLWVTVYYGVPVWKEA-----------TTTLFCASDAKAYDT-----------EVHNVWATHACVPTDPNPQEVVLVNVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTGGSVITQACPKVSFEPIPIHYCAPAGFAILKCNNKTFNGTGPCTNV---STVQCTHGIRPVVSSQLLLNGSLAEEEVVIRSVNFTDN-AKTIIVQLNTSVEINCTGAGHCNIARAKWNNTLKQIASKLREQFGNNKTIIFKQSSGGDPEIVTHWFNCGGEFFYCNSTQLFNSTWFNSTEGSDTITLPCRIKQIINMWQKVGKAMYAPPISG-QIRCSSNITGLLLTRDGGNSNNESEIFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTKA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 639 for 2199 contacts (0.3/contact) +
2D Compatibility (PS) -33808 + (NN) -1386 + (LL) 2516
1D Compatibility (HY) -7200 + (ID) 2850
Total energy: -42089.0 ( -19.14 by residue)
QMean score : 0.173
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