Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LYEKLVNKYQDEVTIREEKMPYKLPGLYLNGMIFISKDQSSIEKGCVLVEELMHYKYTVGNITKQETIMDKKQ----EIFARRKGYEELIPLDDIIACFYLGLREYFEVAEFLEVTEEFLRHTVSHYAEKYGPMYDYGGYFINFGNSIDVYKKF------------------------------------------------------------------------------------------- |
| 4D0L Chain:A ((10-566)) | SWLLRLFESKLFDISMAISYLYNSKEPGVQAYIGNRLFCFRNEDVDFYLPQLLNMYIHMDEDVGDAIKPYIVHRCRQSINFSLQCALLLGAYSSRGTKLRKLILSRLAPEREFIKSLMAIGKRLATLPTKEQKTQRLISELSLLNHKLPARVWLPTAGFDHHVVRVPHTQAVVLNSKDKAPYLIYVEVLECENFDTTSVPARIPENPSAVALKEPWQEKVRRIREGSPYGHLPNWRLLSVIVKCGDDLRQELLAFQVLKQLQSIWEQERVPLWIK----PYK--------ILVISADSGMIE--------------PVVNAVSIHQVKKQSQLSLLDYFLQEHGSYTTEAFLSAQRNFVQSCAGYCLVCYLLQVKD---RHNGNILLDAEGHIIH-----IDFGFILSSSSAFKLTTEFVDVMGGLDGDMFNYYKMLMLQGLIAARKHMDKVVQIVEIMQQGSQLPCFHGSSTIRNLKERFHMSMTEEQLQLLVEQMVDGSMRS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D0L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2964 for 720 contacts (-4.1/contact) +
2D Compatibility (PS) -12392 + (NN) -3540 + (LL) 2312
1D Compatibility (HY) -6800 + (ID) 1300
Total energy: -24684.0 ( -34.28 by residue)
QMean score : 0.404
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