Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRIGQGYDVHKLAYDRDLIIGGVKIPYEKGLLGHSDADVLLHAITDAIIGAIGAGDIGHFFPDTDMVFKDADSAELLAEIWQKVEADGFRLGNLDATIIAEKPKMAPYVEQMKLRIAELLHADSAQVNVKATTTEKLGFTGREEGIASLAVVLLEK
4C8I Chain:C ((24-179))
-VRIGQGYDVHQLVEGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHF-------KGADSRVLLRACAERVKAAGFTIQNVDSTVIAQAPKLAPHIDGMRANIAADLGLPLERVNVKAKTNEKLGYLGRGEGIEAQAAALLVK
General information:
TITO was launched using:
RESULT:
Template:
4C8I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105016 for 1272 contacts (-82.6/contact) +
2D Compatibility (PS) -16219 + (NN) -9349 + (LL) 500
1D Compatibility (HY) -12800 + (ID) 4400
Total energy: -147284.0 ( -115.79 by residue)
QMean score : 0.623
(partial model without unconserved sides chains):
PDB file :
Tito_4C8I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4C8I-query.scw
PDB file :
Tito_Scwrl_4C8I.pdb
: