Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMRKPLVGINMKNYINTRAQTSEWLEATIPLLGNFSDVDTFIFPSMGTLETTANLLAGTSFGFGPQNMAPEKSGPLTGEFSVESIIDLSANYVEIGHAERKNLFHEKTSEIAKKIQLALDEKITPVVCVGEGIRANDTNELKNALKKQIEALFDTIQVTQFKNVVLAYEPEWAIGKANSADTDYIESAHQALREIIRELGGD--ETLVRIIYGGSVSKENAAEIVRQKNVDGLFVGRFGHKPQNFADIVSIVSKTKG
1YYA Chain:B ((1-248))MRRVLVAGNWKMH-KTPSEARVWFAELKRLLPPLQS-EAAVLPAFPILPVAKEVLAETQVGYGAQDVSAHKEGAYTGEVSARMLSDLGCRYAIVGHSERRRYHGETDALVAEKAKRLLEEGITPILCVGEPLEVREKGEAVPYTLRQLRGSLEGVEPPGPEALVIAYEPVWAIGTGKNATPEDAEAMHQAIRKALSERYGEAFASRVRILYGGSVNPKNFADLLSMPNVDGGLVGGASLELESFLALLRI------


General information:
TITO was launched using:
RESULT:

Template: 1YYA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -121308 for 2141 contacts (-56.7/contact) +
2D Compatibility (PS) -26760 + (NN) -9788 + (LL) 568
1D Compatibility (HY) -14400 + (ID) 4000
Total energy: -175688.0 ( -82.06 by residue)
QMean score : 0.560

(partial model without unconserved sides chains):
PDB file : Tito_1YYA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YYA-query.scw
PDB file : Tito_Scwrl_1YYA.pdb: