Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISIVLVSHSQKITEGLQEMIVEMVGDTVHIISSGG--TGDGRL--------GTNAIMIADNIATCTNS---EHIYIFCDIGSA-------------ILSAETA-LELLDTDLLEKTTIIDAPLVEGAFTAAVQSLVNPSKEAILQELTNVH----
1MXI Chain:A ((1-156))
MLDIVLYEPEIPQNTGNIIRLCANTGFRLHLIEPLGFTWDDKRLRRSGLDYHEFAEIKRHKTFEAFLESEKPKRLFALTTKGCPAHSQVKFKLGDYLMFGPETRGIPMSILNEMPMEQKIRIPMTANSRSMNLSNSVAVTVYEAWRQLGYKGAVNL
General information:
TITO was launched using:
RESULT:
Template:
1MXI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72934 for 851 contacts (-85.7/contact) +
2D Compatibility (PS) -13566 + (NN) -4220 + (LL) 0
1D Compatibility (HY) -4400 + (ID) 1050
Total energy: -96170.0 ( -113.01 by residue)
QMean score : 0.251
(partial model without unconserved sides chains):
PDB file :
Tito_1MXI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MXI-query.scw
PDB file :
Tito_Scwrl_1MXI.pdb
: