Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAFRENVLEILEEITETDEVVQNTNIKLF-DEGLLDSMATVQLLIEIEEKLDITVPVSEFDRDEWATPEMIITQLEALK
2CGQ Chain:A ((3-71))
----EAINATIQRILRTDR-GITANQVLVDDLG-FDSLKLFQLITELEDEFDIAISFRDAQN--IKTVGDVYTSVAV--
General information:
TITO was launched using:
RESULT:
Template:
2CGQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31214 for 434 contacts (-71.9/contact) +
2D Compatibility (PS) -7281 + (NN) -2141 + (LL) 1220
1D Compatibility (HY) -4800 + (ID) 900
Total energy: -45116.0 ( -103.95 by residue)
QMean score : 0.587
(partial model without unconserved sides chains):
PDB file :
Tito_2CGQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CGQ-query.scw
PDB file :
Tito_Scwrl_2CGQ.pdb
: