Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------MQLLKDKFG-RVHDYIRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFMELMVKFGIKKVRITGGE-PLLRTDIVEIVRGLGAIPEIEDISITTNA-MYLAKKAEALKEAGLTRVNISLDSLHADRFKAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDDEITDFLRFTKDKDINIRFIEYMPIGHAGTSWKEKYLPLDTIFEACNEAGYEYEPVDSIRGNGPSENFRIKGAKGTFGVIHPVSAHFCDSCNRL--RLTADGYIKACLYWDEEMNIRPFIQDPVKLMQLVQKAIDNKPENHEMALKLQDEVQSNKPTWRRMSQIGG |
| 3T7V Chain:A ((12-348)) | SLGDKVIEGYQLTDNDLRTLLSLESKEGLERLYSAARKVRDHYFGNRVFLNCFIYFSTYCKNQCSFCYYNCRNEINRYR--LTMEEIKETCKTLKGAGFHMVDLTMGEDPYYYEDPNRFVELVQIVKEELGLPIMISPGLMDNATLLKAREKGANFLALYQETYDTELYRKLRVGQSFDGRVNARRFAKQQG-YCVEDGILTGVGNDIESTILSLRGMSTNDPDMVRVMTF-LPQEGTPLEG---------FRDKSNLSELKIISVLRLMFPKRLI---PASLDLEGIDGMVLRLNAGANIVTSILPPDSQLEGVANYDRD------LEERDRDIKSVVRRLEIMGMKPARQADFEAVL--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3T7V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95650 for 2514 contacts (-38.0/contact) +
2D Compatibility (PS) -31482 + (NN) -5500 + (LL) 2268
1D Compatibility (HY) -8400 + (ID) 2100
Total energy: -140864.0 ( -56.03 by residue)
QMean score : 0.324
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