Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------------------------------------------------------------------------------------------LKKMMVMGSVGCGKTTLCQKLHGYDILYKKTQAVEYFQEMIDTPGEFVQH--RQLYSALTVTAADAS----VIAIL------QSVTEKKQTFSPMFASIFA--KPVIGIVTKVDLAESDKDIERAERELRMAGA----KHIFYISSVEETGIEELRAYLED----- |
| 2QTH Chain:A ((1-355)) | MKTAALFVSKEFEEEAIALVEGANYKVTSIYKLPKSPNVKFYIQYDKLQQIKNDEEISTLIIFEQLKPRHFINIRRELKGKEVLDKILLLLEIFALHAGSKEAKMQIELARLKYELPIIKETSTIKFYKRRINKLMKELESIKIIPSIGIVGYTNSGKTSLFNSLTGLMSPKRYAIPINNRKIMLVDTVGFIRGIPPQIVDAFFVTLSEAKYSDALILVIDSTFSENLLIETLQSSFEILREIGVSGKPILVTLNKIDKINGDLYKKLDLVEKLSKELYSPIFDVIPISALKRTNLELLRDKIYQLATQL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QTH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60415 for 1003 contacts (-60.2/contact) +
2D Compatibility (PS) -15348 + (NN) -451 + (LL) 0
1D Compatibility (HY) -7600 + (ID) 1500
Total energy: -85314.0 ( -85.06 by residue)
QMean score : 0.391
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