Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDILQTANERMEQLAALMNKDIEQKIPAGEKVKVGVDLGTSSIVFVVLDENNVPLFGAFEFADAVRDGLVVNYRESVEVVTRLKNRAEKCLGISLTHASGAIPPGTVGNNKKVVANVIESAGMEALYTIDEPTAAAAVLDLQNGAVVDVGGGTTGISVFENGEVIYTADEPT---GGTHMTLVLAGYYGVPVEEAEQN---------------KRAQKDSSEHF-------SVMRPVVEKMAEITRVHLEK-SPSEPLYIVGGASAYSQFKDTFESYLKMPVFQPNYPQYVTPLGIAMSSGSENL- |
| 1HUX Chain:A ((2-260)) | -----------------------------SIYTLGIDVGSTASKCIILKDGKEIVAKSLVAVG---TGTSGPARSISEVLENAHMKKEDMAFTLAT-----------GYGRNSLEGIAD----KQMSELSCHAMGASFIWPNVHTVIDIGGQDVKVIHVENGTMTNFQMNDKCAAGTGRFLDVMANILEVKVSDLAELGAKSTKRVAISSTCTVFAESEVISQLSKGTDKIDIIAGIHRSVASRVIGLANRVGIVKDVVMTGGVAQNYGVRGALEEGLGVEIKTSPLAQYNGALGAALYAYKKAAK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HUX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86750 for 2061 contacts (-42.1/contact) +
2D Compatibility (PS) -24854 + (NN) -10571 + (LL) 3384
1D Compatibility (HY) -6400 + (ID) 1750
Total energy: -126941.0 ( -61.59 by residue)
QMean score : 0.399
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