Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNLESVEQFNAIKSEGKSVFMFSADWCGDCKFIEPVMPEIEAENED-FSFYHVDRDEFIDLCADLAIFGIPSFLAFEDGEEVGRFVSKDRK--TKEEINDFLAAI
2YJ7 Chain:A ((16-106))
------------LKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENPNTAAQYGIRSIPTLLLFKNGQVVDRLVGAQPKEALKERIDKHL---
General information:
TITO was launched using:
RESULT:
Template:
2YJ7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42400 for 586 contacts (-72.4/contact) +
2D Compatibility (PS) -9290 + (NN) -1696 + (LL) 1548
1D Compatibility (HY) -8000 + (ID) 1550
Total energy: -61388.0 ( -104.76 by residue)
QMean score : 0.561
(partial model without unconserved sides chains):
PDB file :
Tito_2YJ7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2YJ7-query.scw
PDB file :
Tito_Scwrl_2YJ7.pdb
: