Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIAIFASGSGSNFQALVD---DEFIKPYVKLLVCDKPNAYVLERANKHDIPVFLFEAKNYPDKEAFETEILLELRRLEIDLLVLAGYMRLIGPTLLAEFPEQIVNLHPSLLPEFKGKDAIGQAIQANVSGTGVTAHFVDAGMDTGPIIDQVKVTIETAETTDTLAEKIHQVEHIFYPKVIRGLIQNGGND
3GAR Chain:A ((1-181))
MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASAFDSREAYDRALIHEIDMYAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQAKVPVFAGDSEDDITARVQTQEHAIYPLVI----------
General information:
TITO was launched using:
RESULT:
Template:
3GAR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -150015 for 1401 contacts (-107.1/contact) +
2D Compatibility (PS) -19775 + (NN) -14607 + (LL) -152
1D Compatibility (HY) -14400 + (ID) 3050
Total energy: -201999.0 ( -144.18 by residue)
QMean score : 0.609
(partial model without unconserved sides chains):
PDB file :
Tito_3GAR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GAR-query.scw
PDB file :
Tito_Scwrl_3GAR.pdb
: