Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFAVIQFPGSNCDLDMLHAIRDSLGEEAEYIWHAETSLAGFDA-----VLLPGGFSYGDYLRTGAIAKFSSIMPEVLRFAEMGKPVLGVCNGFQILTEIGLLPGALIRNNNLHFICKTVPLRVANASTMFTELYEEGEIIQVPVAHGEGNYYCDDETLLKLKENNQIVFTYDSVNPNGSRADIAGIVNERGNVLGMMPHPERAVEEIIGGTDGLRLFESVVKAWKEEQVNA
1QDL Chain:B ((1-195))
MDLTLIIDNYDSFVYNIAQIVGE-LGSYPIVIRNDEISIKGIERIDPDRLIISPG--PGTPEKREDIGVSLDVIKYL---GK-RTPILGVCLGHQAIGYA---FGAKIRRARKVFHGKISNIILVNNSP--LSLYYGIA--------KEFKATRYHSLVVD--EVHRPLIVDAISAEDNE---IMAIHHEEYPIYGVQFHPESV-----GTSLGYKILYNFLNRV-------
General information:
TITO was launched using:
RESULT:
Template:
1QDL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91794 for 1686 contacts (-54.4/contact) +
2D Compatibility (PS) -20254 + (NN) -4338 + (LL) 4036
1D Compatibility (HY) -9200 + (ID) 1950
Total energy: -123500.0 ( -73.25 by residue)
QMean score : 0.404
(partial model without unconserved sides chains):
PDB file :
Tito_1QDL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QDL-query.scw
PDB file :
Tito_Scwrl_1QDL.pdb
: