Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMDTSRKIIHIDMDAFYASVEQRDHPEFRGKPLII---GGDPNKRGVVATCSYEARKFGVHSAMPTRQAAKLCPNGIFIHGNMAHYVEVSNQIREIFSRYTDIIEPLSLDEAYLDVTENKKGMKSATMVAREIQQTIYQELGLTASAGVSFNKFIAKIASDFKKPAGITVVTPEEAEAFLEQIPVTKFYGVGKVTAEKLHRLGIETGADLKKWSEWDLIREL--HKHGYHLYRHVRGRSNNIVNPHRDRKSVGKETTFEFNVLDSRVLEQSLMQFAKKVEERLIKLQKHGKTVVLKLRYSDFTTITKRLTLNEYTNDASQIYQAAALLLIESYTGQDSIRLIGLTVTNLKPVYFENLRLEGL
2VA2 Chain:B ((9-285))------VLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSI-EFDKLKGMIGEAKAKYLISLARDEYNEPIR-TRVRKSIGRIVTMKRN---SRNLEEIKPYLFRAIEESYYKLDKR-------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2VA2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -124150 for 2028 contacts (-61.2/contact) +
2D Compatibility (PS) -29308 + (NN) -9762 + (LL) 6232
1D Compatibility (HY) -20800 + (ID) 4800
Total energy: -182588.0 ( -90.03 by residue)
QMean score : 0.514

(partial model without unconserved sides chains):
PDB file : Tito_2VA2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VA2-query.scw
PDB file : Tito_Scwrl_2VA2.pdb: