Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGAKKPLFEVIASEIKDSINRDEYKTGMLMPNETALQEIFSSSRTTIRRAVDLLVEEGLVVRKNGVGLYVQPKLTSQ-NILEMTGVMKTDTNENLKKDIKDFYIRKAGKFYAEKFGIKENELVYSIKFVQKSE-NGVTLDRLILPLSLYPDLQAKDFQIINIIELVNSGKYKLFELEQELQLILAGNEQIKNMHINENDPVFKLSSVFYAENEMPIAIQYHYEDAESTKYVVDFN--- |
3F8M Chain:A ((14-243)) | ------LKHQVVRAELDRMLDG-MRIGDPFPAEREIAEQFEVARETVRQALRELLIDGRVERRGRTTVVARPKIRQPLGMGSYTEAAK-AQGLSAGRILVAWSDLTADEVLAGVLGVDVGAPVLQLERVLTTDGVRVGLETTKLPAQRYPGLRETFDHEASLYAEIRSRGIAFTRTVDTIDTALPDAREAALLGADARTPMFLLNRVSYDQDDVAIEQRRSLYRGDRMTFTAVMHAKN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3F8M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60783 for 1644 contacts (-37.0/contact) +
2D Compatibility (PS) -23814 + (NN) -828 + (LL) 324
1D Compatibility (HY) -4800 + (ID) 1950
Total energy: -91851.0 ( -55.87 by residue)
QMean score : 0.411
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