Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIYFDHAATTKMSEAALEVFMSASREFFANSESLHDAGTKSAALLEKCRGSFAEILHVPSRGIMFTSGGTESNQIAIQTLLHSTKKKE-----VLVSPLEHASVWQQLEALEEAGACWLRLLPVDAFGRVDPAVLSDMI--SPDTGLVIIQHVNSEIGSIQPIRELAHIAKQAGVYFHTDIVQSFGKLDLTLDD--VTSFSISSHKIYGPKGAGLLFIKPDVPMQVPLPNVHHEFGFRPGTVNVPAIAAFTTAAYDIMGNREKEARRIAELKKAICEALTAK---VKVEGGLNTSPFI--LGITLPNMQGQEALLALNEADIQISTTSACSLRDPAPSRTLLATGKTIEEASRFIRLSFGRENELSDSLIFKKELDKLLRKR------ |
| 4ISY Chain:A ((12-398)) | SAYLDHAATTPMHPAAIEAMAAVQRTI-GNASSLHTSGRSARRRIEEARELIADKLGARPSEVIFTAGGTESDNLAVKGIYWARRDAEPHRRRIVTTEVEHHAVLDSVNWLVEHEGAHVTWLPTAADGSVSATALREALQSHDDVALVSVMWANNEVGTILPIAEMSVVAMEFGVPMHSDAIQAVGQLPLDFGASGLSAMSVAGHKFGGPPGVGALLLRRDVTCVPLMHGGGQERDIRSGTPDVASAVGMATAAQIAVDGLEENSARLRLLRDRLVEGVLAEIDDVCLNGADDPMRLAGNAHFTFRGCEGDALLMLLDANGIECSTGS--------PSHVLIAMGVDAASARGSLRLSLGHTSVEADVDAALEVLPGAVARARRAALA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ISY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -206287 for 3206 contacts (-64.3/contact) +
2D Compatibility (PS) -40236 + (NN) -29148 + (LL) 508
1D Compatibility (HY) -17600 + (ID) 5250
Total energy: -298013.0 ( -92.95 by residue)
QMean score : 0.503
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