Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLKKVAMGITVVMASSLLLVGCGSSDDSSKDKKSTDTKQTETKKTAKTDGTMTDGTYKLEEKNFDDKGWKGFMSIEVKDGKITKANYD------YKNKDGKLKSEDADY-EKAMKDKVGTGPQEYLKQLSDSLVKNQSAASVEVVSGATHSSDAFINYANQLIQAAQKADTTTISINNLAKMEDGTYK----LEEQNYAHGYRVVFSMD------VKDGK------ITKSDYNYVDKDGKLKSDDADYEKNMKAKSGTG-PKEYIPALNKSLVEKQD--VAAVDTVSGATNSSNQFKIYAAQLQNAAQNGNTDTIKVYNLVEAE-
4QFR Chain:C ((28-322))---------YTTFMKSH----RCYDLIPTSSKLVVFDTSL-QVKKAFFALVTNGVRAAPLWDSK--KQSFVGMLTIT-DFINILHRYYKSALVQIYELEEHKIETWREVYLQDSFKPLVCISPNASLFDAVSSLIRNK-IHRLPVIDPESGNTLYILTHKRILKFLKLF-------ITSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVSVTKALQHRVLKCYLHETLEAIINRLVEAEVHRLVVVDE----------------------HDVVKGIVSLSDILQALV


General information:
TITO was launched using:
RESULT:

Template: 4QFR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 79584 for 1794 contacts (44.4/contact) +
2D Compatibility (PS) -26718 + (NN) -4093 + (LL) 3836
1D Compatibility (HY) -14000 + (ID) 2400
Total energy: 36209.0 ( 20.18 by residue)
QMean score : 0.258

(partial model without unconserved sides chains):
PDB file : Tito_4QFR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4QFR-query.scw
PDB file : Tito_Scwrl_4QFR.pdb: