Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------MTKTLVLAEKPSVGKDIGRVLGAKQGKNGYLEGGK-----YVVTWAL-GHLVTLA--------DPERYDSKYKNWNMEDLPMLPEKMKLEPIKQTRKQYETVKKLMNRT--DITTIVIATDAGREGELVARWIIDYAKIKKP---LKRLWISSVTDKAIREGFEHLKPGKAYENLYHSAVARSEADWVVGINATRALTTKYNAQ---------LSCGRVQTPTLAMIQHREEEIRNFKSREYYGITALTEQES----FTWNNGQTFDKALAEKLVKSL-QGENAVITDVSMKEKKTFSPGLYDLTELQRDANNRYDFSAKETLNIMQTLYERHKVLTYPRTDSRFISTDIVPTLKERLVACGVGEN-AKAARQISVK--PIKANKSFVDNSKVSDHHAIIPTEQPVSLGDLSDKERKIYDLVVKRFLAVLSDPYIYEETSVKAKIGQEEFTLKGKVVKSLGWKSIYGESREPDQ-LTKMKKGDTIPVKRINLETGKTKPPARFDEATLLSAMENPSKYMETTNKALAKTLGETGGLGTVATRADIIEKLFNSFSLEKQ-GKDIQITSKGRQLLELVPE---DLKSPELTARWEQKLSKIAKGELDYRKFTAEMRDYAKKAVTEIKQNDKKFRHDNITSQKCPDCGKPMLKVKGKRGTMLVCQDRECGHRESVSRTTNARCPNCHKRMEMRGEGDKQIFVCVCGHREKLSAFQQRRDKQKNKNVSKTDVAKFMKKQNKQEDEPFNNPMAEALAKLKLDK- |
| 4CGY Chain:A ((22-640)) | FSRAAMEMALRGVRKVLCVAEKNDAAKGIADLLS--NGRMRRREGLSKFNKIYEFDYHLYGQNVTMVMTSVSGHLLAHDFQMQFRKWQSCNPLVLFE---AEIEKYCPENFVDIKKTLERETRQCQALVIWTDCDREGENIGFEIIHVCKAVKPNLQVLRARFSEITPHAVRTACENLTEPD--QRVSDAVDVRQELDLRIGAAFTRFQTLRLQRIFPEVLAEQLISYGSCQFPTLGFVVERFKAIQAFVPEIFHRIKVTHDHKDGIVEFNWKRHRLFNHTACLVLYQLCVEDPMATVVEVRSKPKSKWRPQALDTVELEKLASRKLRINAKETMRIAEKLYTQGYI-SYPRTETNIFPRDL--NLTVLVEQQTPDPRWGAFAQSILERGGPTPRNGNKSDQA----HPPIHPTKYT---NNLQGDEQRLYEFIVRHFLACCSQDAQGQETTVEIDIAQERFVAHGLMILARNYLDVYPYDHWSDKILPVYEQGSHFQPSTVEMVDGETSPPKLLTEADLIALMEKH-------------------GIGTDATHAEHIETIKARMYVGLTPDKRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICDGKKDKFVVLRQQVQKYKQVFIEAVAK--------------------------------------------------------------------------------------------------------------------AKKLDEALAQYFGNGT |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4CGY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -105211 for 4523 contacts (-23.3/contact) +
2D Compatibility (PS) -61797 + (NN) -21303 + (LL) 8840
1D Compatibility (HY) -27200 + (ID) 7550
Total energy: -214221.0 ( -47.36 by residue)
QMean score : 0.442
|
|
|