Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRDEVFEKMLELLRQQLGDPQLDITPESSLHDDLAIDSIALTEFIINLEDVFHLEIPDEAVEHMSSVQQLLDYIIEHK
2QNW Chain:A ((8-81))
-----LLERVKDVVADQLGVDRARINPESNFIKDLDADSLDSVELVMAFEEKFGVSIPDEEASKIATVQDALSYIEKAK
General information:
TITO was launched using:
RESULT:
Template:
2QNW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62964 for 507 contacts (-124.2/contact) +
2D Compatibility (PS) -8079 + (NN) -6258 + (LL) 308
1D Compatibility (HY) -5600 + (ID) 1250
Total energy: -83843.0 ( -165.37 by residue)
QMean score : 0.770
(partial model without unconserved sides chains):
PDB file :
Tito_2QNW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QNW-query.scw
PDB file :
Tito_Scwrl_2QNW.pdb
: