Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVLEQKLDHLVSQILLKAENQHELLFGTCQSDVKLTNTQEHILMLLSQEQLTNSDLAKKLNISQAAVTKAVKSLISQDMLKANKDSKDARITYFELSELAKPIADEHTHHHDNTLGVYGRLVNHFSKDEKVVLERFLDLFSRELEG
3TGN Chain:A ((1-145))
MRQLAKDINAFLNEVILQAENQHEILIGHCTSEVALTNTQEHILMLLSEESLTNSELARRLNVSQAAVTKAIKSLVKEGMLE----------TFYQLTDLARPIAEEHHHHHEHTLLTYEQVATQFTPNEQKVIQRFLTALVGEI--
General information:
TITO was launched using:
RESULT:
Template:
3TGN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51532 for 854 contacts (-60.3/contact) +
2D Compatibility (PS) -13853 + (NN) -5314 + (LL) 392
1D Compatibility (HY) -15600 + (ID) 3550
Total energy: -89457.0 ( -104.75 by residue)
QMean score : 0.586
(partial model without unconserved sides chains):
PDB file :
Tito_3TGN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TGN-query.scw
PDB file :
Tito_Scwrl_3TGN.pdb
: