Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFYTQNEEELIALGQKLGTVLKSGDIVLLTGNLGAGKTTLTKGIAKGLDIKQMIKSPTYTIVREYEG-RVPLYHLDVYRIGD--DPDSIDLDDFLFGQGVTVIEWGELLSDNLINNYLEIVITRSNQGRQVQLEAYGHRAREIIEAIQDV
1HTW Chain:A ((23-153))
-------------EILLKLHTEKAIMVYLNGDLGAGKTTLTRGMLQGIGHQGNVKSPTYTLVEEYNIAGKMIYHFDLYRLADPEELEFMGIRDYFNTDSICLIEWSEKGQGILPEADILVNIDYYDDARNIELIAQTNLGKNIISAFSN-
General information:
TITO was launched using:
RESULT:
Template:
1HTW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68689 for 935 contacts (-73.5/contact) +
2D Compatibility (PS) -13448 + (NN) -2836 + (LL) 1640
1D Compatibility (HY) -9600 + (ID) 2100
Total energy: -95033.0 ( -101.64 by residue)
QMean score : 0.434
(partial model without unconserved sides chains):
PDB file :
Tito_1HTW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HTW-query.scw
PDB file :
Tito_Scwrl_1HTW.pdb
: