Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGNIE---LKKLAVKASENAYVPYSKFPVGAALRTAEGKIFTGCNVENISYGLANCAERTAIFKAVSEGYKDFSEIAIYGNTEEPISPCGACRQVMVEFFNKNAKVTLIAKNGKTVETTVGELLPYSFVDLK
3R2N Chain:B ((5-125))
MGDVNWDTLQKAAVAARANSYAPYSNFPVGVAGFVNDGRLITGVNVENASYGLALCAECSMISALYATGGGRLVAVYCVDGNGDSLMPCGRCRQLLYEHGGPELKIMTP----KGVQ-TMAQLLPQ------
General information:
TITO was launched using:
RESULT:
Template:
3R2N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48002 for 924 contacts (-52.0/contact) +
2D Compatibility (PS) -12626 + (NN) -3981 + (LL) 468
1D Compatibility (HY) -8400 + (ID) 2400
Total energy: -74941.0 ( -81.10 by residue)
QMean score : 0.593
(partial model without unconserved sides chains):
PDB file :
Tito_3R2N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R2N-query.scw
PDB file :
Tito_Scwrl_3R2N.pdb
: