Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTQPILQVSDLSVYYNKKKALKEVSMDFYPNEITALIGPSGSGKSTLLRAINRMGDLNPEVTLTGAVMYNGHNVYSPRTDTVELRKEIGMVFQQPNPFPMSVFENVVYG------LRLKGIKDKATLDEAVETSLKGASIWDEVKDRLHDSALGLSGGQQQRVCIARTLATKPKIILLDEPTSALDPISAGKIEETLHGLKDQYTMLLVTRSMQQASRISDRTGFFLDGNLIEYGNTKEMFMNPKHKETEDYITGKFG
4AYW Chain:A ((391-598))--------------------FQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYD-----PASGTISLDGHDIR--QLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTV---VGEKGVLLSGGQKQRIAIARALLKNPKILLLDE----LDAENEYLVQEALDRLMDGRTVLVIAHHLSTIKN-ANMVAVLDQGKITEYGKHEE-------------------


General information:
TITO was launched using:
RESULT:

Template: 4AYW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57440 for 1480 contacts (-38.8/contact) +
2D Compatibility (PS) -21185 + (NN) -5745 + (LL) 2896
1D Compatibility (HY) -14400 + (ID) 3450
Total energy: -99324.0 ( -67.11 by residue)
QMean score : 0.359

(partial model without unconserved sides chains):
PDB file : Tito_4AYW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4AYW-query.scw
PDB file : Tito_Scwrl_4AYW.pdb: