Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------MKLLEERILKDGDVLGENI--LKVDSFL-THQVDFELMQEIGKVFADKYKEAGITKVVTIEASGIAPAVYAAQALGVPMIFAKKAKNITMTEGILTAEVYSFTKQVTSQVSIVSRFLSNDDTVLIIDDFLANGQAAKGLLEIIGQAGAKVAGIGIVIEKSFQDGRDLLEKTGVPVTSLARIKAFENGRVVFAEADA
1G2Q Chain:A ((1-178))
MPIASYAQELKLALHQYPNFPSEGILFEDFLPIFRNPGLFQKLIDAFKLHLEEAFPEVKIDYIVGLESRGFLFGPTLALALGVGFVPVRKAGKL---PGECFKATYEKEYG-SDLFEIQKNAIPAGSNVIIVDDIIATGGSAAAAGELVEQLEANLLEYNFVMELDFLKGRSKLNA---PVFTLL-----------------
General information:
TITO was launched using:
RESULT:
Template:
1G2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123124 for 1295 contacts (-95.1/contact) +
2D Compatibility (PS) -18498 + (NN) -7112 + (LL) 2148
1D Compatibility (HY) -10800 + (ID) 1900
Total energy: -159286.0 ( -123.00 by residue)
QMean score : 0.536
(partial model without unconserved sides chains):
PDB file :
Tito_1G2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G2Q-query.scw
PDB file :
Tito_Scwrl_1G2Q.pdb
: