Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRKDLFGDKQTQYTIRKLSVGVASVATGVCIFLHSPQVFAEEVSVSPATTAIAKSNINQVDNRQSTNLKDDINSNSETVVTPSDMPDTKQLVSDETDTQKGVTEPDKATSLLEENKGPVSDKNTLDLKVAPSTLQNTPDKTSQAIGAPSPTLKVANQAPQIENGYFRLHLKELPQGHPVESTGLWIWGDVDQPSSNWPNGAIPMTNAKKDDYGYYVDFKLSEKQRKQISFLINNKAGTNLSGDHHIPLLRPEMNQVWIDEKYGIHTYQPLKEGYVRINYLSSSGNYDHLSAWLFK-DVATPSTTWPDGSNFVNQGLYGRYIDVPLKTNAKEIGFLILDESKTGDAVKVQPNDYVFRDLANHNQIFVKDKDPKVY-NNPYYIDQVQLKDAQQTDLTSIQASFTTLDGVDKTEILKELKVTDKNQNAIQISDITLDTSKSLLIIKGDFNPKQGHFNISYNGNNVTTRQSWEFKDQLYAYSGNLGAVLNQDGSKVEASLWSPSADSVTMIIYDKDNQNRVVATTP-LVKNNKGVWQTILDTKLGIKNYTGY-YYLYEIKRGKDKVKILDPYAKSLAEWDSNTVNDDIKTAKAAFVNPSQLGPQNLSFAK-IANFKGRQDAV---IYEAHVRDFTS-DQSLDGKLKNQFVTFAAFS----EKLDYLQKLGVTHIQLLPVLSYFYVNEMDKSRS-----------------------------------TAYTSSDN-----------------NYNWGYDPQSYFALSGMYSEKPKDPSARIAELKQ-LIHDIHKRGMG-VIL-DVVYNHTA------KTYLFEDIEPNYYHFMNEDGSPRESFGGGRLGTTHAM-SRRVLVDSIKYLTSEFKVDGFRFDMM-GDHDAAAIELAYKEAKAINPNMIMIGEGWRTFQGDQGKPVKPADQDWMKSTDTVGVFSDDIRNSLKSGFPNEGTPAFITGGP--------------------QSLQGIFK-------------------------NIKAQPGNFEADSPGDVVQYIAAHDNLTLHD-VIAKSINKDPKVAEEEIHRRLRLG-NVMILTS----QGTAFIHSGQEYGRTKRLLNPDYMTKVSDDKLPNKATLIEAVKEYPYFIHDSYDSSDAINHFDWAAATDNNKHPISTKTQAYTAG-LITLRRSTDAFRKLSKAEIDREVSL-ITEVGQGDIKE-KDLVIAYQTIDSKGDIYAVFVNADSKAR-NVLLGEKYKHLLKGQVIV-DADQA-GIKPISTPRGVHFEKDSLLIDPLTAIVIKVGKVAPSPKEELQADYPKTQSFKGSKTVEKVNRIANKT-SITPVVSNKTDSYLTNEANLPKTGDKSSKILSVVGISILASLLALLGLSLKRNRHLK |
| 2YOC Chain:A ((20-1070)) | ----------------------------DVVVRLPDVAVPGEAVTAVENQAVIHLVDIAGITSSSAADYSS--------------------------------------KNLYLWN-----------------------NETCDALSAPVAD-----------------------------------WNDVSTTPSG------------SDKYGPYWVIPLN-KESGCINVIVRDGTDKLIDSDLRVA-------------------FGDFTDRTVSVIAGNSAVYDSRADAFRAAFGVALAEAHWVDKNTLLWPGGQDK-------------PIVRLYYSHSSKVAADGEGKFTDRYL----KLTPTTVSQQVSMRFPHL---------------SSYAAFKLPDNANVDELLQ---------------------GETVAIAA----AEDG---ILISATQVQTAGVLDDAYAEAAEALSYGAQLADGG--VTFRVWAPTAQQVDVVVYSADK--KVIGSHPMTRDSASGAWSWQGGSDLKGAFYRYAMTVYHPQSRKVEQYEVTDPYAHSLSTNSEYSQVVDL--------NDSALKPDGWDNLTMPHAQKTKADLAKMTIHESHIRDLSAWDQTVPAELRGKYLALTAGDSNMVQHLKTLSASGVTHVELLPVFDLATVNEFSDKVADIQQPFSRLCEVNSAVKSSEFAGYCDSGSTVEEVLNQLKQSDSQDNPQVQALNTLVAQTDSYNWGYDPFHYTVPEGSYATDPEG-TTRIKEFRTMI--QAIKQDLGMNVIMDVVYNHTNAAGPTDRTSVLDKIVPWYYQRLNETTGSVESATCCSDSAPEHRMFAKLIADSLAVWTTDYKIDGFRFDL-MGYHPKAQILSAWERIKALNPDIYFFGEGWDSNQSDR---FEIASQINLKGTG-IGTFSDRLRDSVRGGGPFDSGDALRQNQGIGSGAGVLPNELASLSDDQVRHLADLTRLGMAGNLADFVMIDKDGAAKKGSEIDYNGAPGGY-AADPTEVVNYVSKHDNQTLWDMISYK--------ASQEADLATRVRMQAVSLATVMLGQGIAFDQQGSELLRSKS------------------------------FTRDSYDSGDWFNRVDYSLQDNN-----------YNVGMP---RISDDG----SNYEVITRVKEMVATPGEAELKQMT---AFYQELTELRKSSPLFTLGDGSAVMKRVDFRNTGSDQQAGLLVMTVDDGMKAGASLDSR-------------LDGLVVAIN-AAPES--------------------RTLNEFAGETLQLSAIQQTAGENSLANGVQIAADGTVTLPAWSVAVLELPQGEAQGAGLPVSS----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YOC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50519 for 7767 contacts (-6.5/contact) +
2D Compatibility (PS) -98812 + (NN) -48321 + (LL) 18944
1D Compatibility (HY) -34400 + (ID) 12250
Total energy: -225358.0 ( -29.01 by residue)
QMean score : 0.281
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