Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIELKGVNFKYKNTKNSCLDNIDLEIKKGEFVLISGASGSGKTSITRVINKLIPYYYEGELEGTVKINNDLVSSYQMFELSEIVGSVFQNPRTQFFNVDTNSEIVFGLENQGVSRDILKKRLKETCETLDINKLQNRNIFHLSGGEKQKIAFASVYAMNPDIYLLDEPSSNLDIPTIEVLKRHLSVLKNSGKTVIISEHRIYYLMDLVDKVIYMKNGQIQKSYSKEDFLNLSEDEIKAMALRCRKKTKLNIEMSNNEKHPYLQVNDFSIYRKDNCIINNMNFSANKGDIVAVIGSNGVGKTTFLRTLCGLHDNYKGDVLLNSKK------TDAKKRRQKNYMVMQDVNYQLFAESVFAECKLGIE--NVSDDLIE----EILNEFDLSDYKNNHPNTLSGGQKQRLAIAVGLICKKEIFVLDEPTSGLDYTNMVKTVELLKRYSK--DKIIFIATHDTEFANLICNRVLDLEK |
3TUI Chain:C ((44-234)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNL-LSSRTVFGNVALPLELDNTPKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISN |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3TUI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -106228 for 1329 contacts (-79.9/contact) +
2D Compatibility (PS) -19432 + (NN) -12246 + (LL) 18484
1D Compatibility (HY) -13600 + (ID) 3000
Total energy: -136022.0 ( -102.35 by residue)
QMean score : 0.555
|
|
|