Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKIVVALGGNALGNSPE---EQLRLVKHTAKSLVALIKKGHEIVVSHGNGPQVGAINLGMNFA-AE-SGQGTNFPFPECGAMSQGYIGYHLQQSLLNELRQEGINKEVATIITQIEVDESDQAFSAPTKPIGTFYDKE-------TSEK--IAIEKGY---TFVEDAGRGYRRVVASPEPKKIIE---INSIKTLIENDTLVIAGGGGGIPVIN---KGGYEGIAAVIDKDKSSALLAGELAADQLIILTAVDYVYTQFGKENQKALTEVNENQMIDYVNQGEFAKGSMLPKVIACMSFLDHNPKGTALITSLN-GLEDALDGK-LGTRITK |
2WE5 Chain:A ((2-310)) | GKKMVVALGGNAILSNDASAHAQQQALVQTSAYLVHLIKQGHRLIVSHGNGPQVGNLLLQQQAADSEKNPAMPLD--TCVAMT-QGSIGYWLSNALNQELNKAGIKKQVATVLTQVVVDPADEAFKNPTKPIGPFLTEAEAKEAMQAGAIFKEDAGRGWRKVVPS----------------PKPIDIHEAETINTLIKNDIITISCGGGGIPVVGQELKGVEAV----IDKDFASEKLAELVDADALVILTGVDYVCINYGKPDEKQLTNVTVAELEEYKQAGHFAPGSMLPKIEAAIQFVESQP-NKQAIITSLENLGSMSGDEIVGTVVTK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WE5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112533 for 2310 contacts (-48.7/contact) +
2D Compatibility (PS) -31003 + (NN) -13523 + (LL) 1256
1D Compatibility (HY) -17600 + (ID) 6050
Total energy: -179453.0 ( -77.69 by residue)
QMean score : 0.506
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