Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKEHQKIVVALGGNAILSTDASAK--AQQEALINTSKSLVKLIKEGHDVIVTHGNGPQVGNLLLQQA-ASDSE-KNPAMPLDTCVAMTEGSIGFWLQNALNNELQEQGIDKEVATVVTQVIVDEKDQAFTNPTKPIGPFLSEEDAKK----------QAQETGSKFKEDAGRGWRKVVPSPKPVGIKEASVIRRLVDSGVVVISAGGGGVPVIEDANTKALKGVEAVIDKDFASQTLSELVDADLFIVLTGVDN--VFVNFNKPNQEKLEEVTVSQMKQYITENQFAPGSMLPKVEAAIAFVENKPESRAIITSLENIDNVLAQNAGTQIVAN |
| 1E19 Chain:A ((2-314)) | ----GKRVVIALGGNALQQRGQKGSYEEMMDNVRKTARQIAEIIARGYEVVITHGNGPQVGSLLLHMDAGQ-ATYGIPAQPMDVAGAMSQGWIGYMIQQALKNELRKRGMEKKVVTIITQTIVDKNDPAFQNPTKPVGPFYDEETAKRLAREKGWIVKEDSGRGWRRV----------VPSPDPKGHVEAETIKKLVERGVIVIASGGGGVPVI-LED-GEIKGVEAVIDKDLAGEKLAEEVNADIFMILTDVNGAALYYGTEK--EQWLREVKVEELRKYYEEGHFKAGSMGPKVLAAIRFIEWGG-ERAIIAHLEKAVEALEGKTGTQVLP- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E19.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133641 for 2490 contacts (-53.7/contact) +
2D Compatibility (PS) -32275 + (NN) -11149 + (LL) 892
1D Compatibility (HY) -25200 + (ID) 6750
Total energy: -208123.0 ( -83.58 by residue)
QMean score : 0.538
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