Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGEREGRVDSLLDTLYNLSEEKEAFFITQK-----MKKLFSVKLSKSKVILVAACLL----LAGSGTAYAAHELTKQSVSVSINGKKKHIR---THANTVGDLLETLDIKTRDEDKITPAKQTKITADMDVVYEAAKPVKLTINGEEKTLWSTAKTVGALLDEQDVDVKEQDQIDPAIDTDISKDMKINIEPAFQVTVNDAGKQKKIWTTSTTVADFLKQQKMNIKDEDKIKPALDAKLTKGKADITITRIEKVTDVVEEKIAFDVKKQEDASLEKGKEKVVQKGKEGKLKKHFEVVKENGKEVSRELVKEETAEQSKDKVIAVGTKQSSPKFETVSASGDSKTVVSRSNESTGKVMTVSSTAYTASCSGCSGHTATGVNLKNNPNAKV-IAVDPNVIPLGSKVHVEGYGYAIAADTGSAIKGNKIDVFFPEKSSAYRWGNKTVKIKILN-- |
4LK4 Chain:A ((32-372)) | --------RIINGSNANSAEWPSIVALVKRGADAYQGQFCGGSFLGGRYVLTAAHCFDSRSAASVDVIIGAYDLNNSSQGERIAAQKIYRHLSYSPSNLLNDIAIVELAQTSSLPAITLAGPATRTSL-------PALTPLTVAG-----WGITFT--PILQEVDVDLVSQSLCQIVMQHGISSDPNSTNFCAARLTQGDAGG-----------------------------PIVVKT---GREQLGIVSWGD---------------------EQGTYGVYTNV-----------------SYFRDWITKHTNQLSYDQVANLGIRPLGKVSQSFTYTNLDANALTYTGNTFSSL----PADFSVLSDGCSTK----VTLATGESCSVEVAVDAQ--------HYRQYQYDFELIFSYA------------------GGSKRATSRIQLDT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LK4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 53769 for 2575 contacts (20.9/contact) +
2D Compatibility (PS) -32407 + (NN) 7900 + (LL) 9492
1D Compatibility (HY) -9200 + (ID) 3250
Total energy: 26304.0 ( 10.22 by residue)
QMean score : 0.101
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