Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSERNQRKVYQGRVVSDKMDKTITVVVETYKKHTLYGKRVKYSKKFKAHDE-NNQAKIGDIVKIMETRPLSATKRFRLVEVVEEAVII
3J7A Chain:V ((68-150))
---SIRGRILKGMVISNKMKRTIIIRRNYLHYVKKYNRFEKRHKNIPCHCSPCFDVKEGDIVTVGQCRPLSKTVRFNVLHVEKHQI--
General information:
TITO was launched using:
RESULT:
Template:
3J7A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3225 for 532 contacts (-6.1/contact) +
2D Compatibility (PS) -8727 + (NN) 951 + (LL) 692
1D Compatibility (HY) -4400 + (ID) 1200
Total energy: -15909.0 ( -29.90 by residue)
QMean score : 0.485
(partial model without unconserved sides chains):
PDB file :
Tito_3J7A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J7A-query.scw
PDB file :
Tito_Scwrl_3J7A.pdb
: